A

Acorn NMR software

Adams, M. W.

Akke, M. 1, 2, 3

algorithms

aromatic side chain 1, 2

ASCII data file formats

.asn files

Assign

database

defining a project

defining spectra 1, 2

library file 1, 2

sequential assignment

spin system detection

two-dimensional simulated annealing

visualization tools

assigned resonance list

assignment

homonuclear 2D spectra

individual spin systems

atom specification

automated

prototype pattern detection

automated spin-system detection 1, 2

B

Banks, K. M.

Barkhuijsen

Barkhuijsen, H.

baseline correction

algorithms 1, 2

automatic 1, 2

distortions

setting fraction

baseline point entities

baseline points

adding 1, 2

DC convolution

defining 1, 2

deleting a region 1, 2

Bax 1, 2

Bax, A. 1, 2, 3, 4, 5

Billeter, M. 1, 2

Bruker Aspect console

Bruker spectrometer 1, 2, 3

buffers

built-in data filters

buttons

C

Campbell-Burk, S. L.

.car files 1, 2

carbon chemical shift

Carpenter, T. A.

Case

Chazin, W. J. 1, 2

chemical shift filters

chemical shift library

chemical shifts, editing

clipboard list 1, 2, 3

Clubb, R. T.

command mode, changing to

coordinate information

coordinates, reading into FELIX

COSY

cross peak

model

cross peak data

cubic spline algorithm 1, 2

cursors, correlated

D

data

ASCII file storage

E

Eccles

Ernst 1, 2

ETHERNET transfer of files

expansion area

expansion peaks

exponential linebroadening window function

exponential multiplication

exporting data

NOE restraints to Insight II

extension loops

F

Farmer

Farmer II, B. T. 1, 2

Feature list

Feigon, J.

FELIX

accessing from Insight II

customizing setup

data format

running multiple copies

Felix

Felix

Fesik S. 1, 2

FID, extending 1, 2

files

.par 1, 2

parameter

FLATT baseline correction algorithm 1, 2

methods

triple resonance experiments

Fourier integral transform

frames

fuzzy similarities 1, 2, 3

G

Garotta, G.

Gauss/Lorentz multiplication

Gaussian

linebroadening window function

GE spectrometer

GE/Nicolet 1X80 spectrophotometers

GENET

Gentz, R.

Geppert, T.

Gershater, C. J.

gifts

H

Hajduk, P. 1, 2

heteronuclear spin system detection

Heuer, A.

Hilbert transform

Holak, T.

homonuclear 3D spectra

homonuclear experiments

Howard, J. B.

I

Ikura, M.

individual peaks, integrating

init.mac macro

initialization macro

Insight II coordinate file

integral segments

defining and deleting

saving

integrals

adjusting slope and bias

normalization

intensity plot

interspectral tolerances

IPC facility

IRMA

intensities

IRMA files

reading and displaying

iterative assignment by consensus

J

Jeol Alpha data format

JEOL spectrometer

jeol2felix executable

jump models

K

Kaiser window function

Kermit

kinked baselines 1, 2

Kleywegt 1, 2, 3

Koning

Kordel, J. 1, 2

Kumaresan

Kumaresan, R.

L

Labhardt, A. M.

Lamerichs, R. M. J. N.

line fitting interface 1, 2

linear prediction 1, 2, 3

algorithm

Lorentzian broadening

M

macros

overview

sv2d

sv3d

Marino

Markley, J. L. 1, 2

Massefski 1, 2

Massefski et al. 1, 2

Meadows, R. 1, 2

minimum number of contacts

Model, accessing

Morelle

Morelle, N.

Mueller, L. 1, 2

Müller, L. 1, 2

N

NMR

NOE

calculation 1, 2

distance restraints

matrix

multi-spin relaxation

volume restraints

NOE connectivities

NOESY 1, 2

noise, reducing

nonlinear least squares optimizations

O

Olejniczak et al.

Olejniczak, E. T.

1D data buffers

1D spectra, displaying

operating-system mode, changing to

optimizer, interrupting

option menus

Otting, G.

P

Padilla, A.

Palmer III, A. G. 1, 2, 3

.par file 1, 2

Pardi, A. 1, 2

Park, J. B.

path name, defining

pattern, residue type matching

patterns

and residue types, matching

peaks

integration of individual

phasing, in real time

picking 1D peaks 1, 2

plots

polynomial

adjusting coefficients

baseline correction algorithm

potential neighbor patterns, finding

.ppm files

Prestegard, J. H.

Process1D

project

entity

manipulating 1, 2

prototype

pattern, frequencies

prototype pattern detection

prototype patterns 1, 2

R

residue number, in assignment

resonance assignments

resonance experiments, steps

restraints, exporting to the Insight II environment

.rstrnt files 1, 2

S

scores, listing 1, 2

sequence-specific resonance assignment

sequential

assignment strategy

connectivities

probability scores

sequential assignment

setup

sinebell

Skelton, N. J. 1, 2

spectra

spectrum

adjusting vertical scale

appearance after Fourier transformation

displaying axis

features, calculating separation 1, 2

finding data values

frequency domain commands 1, 2

matching synthetic to real

peak integration of

phase correcting 1, 2

phasing automatically

phasing with parameter settings

referencing 1, 2

saving

spin systems

stages

stacks

T

^³J dihedral restraints

homonuclear spin system detection algorithm

triple resonance spectra 1, 2

TOCSY 1, 2, 3

trapezoidal window function

triple resonance neighbor finding algorithm

triple resonance spin system detection algorithms

Tropp

Tufts, D. W.

tuning parameters

homonuclear systematic search algorithm

simulated annealing detection algorithm

systematic search

type scores

U

uninterrupted pathways

user interface widgets

V

van Ormondt, D.

Varian

Unity console

VXR

Varian spectra, importing

W

Wagner, G. 1, 2

window functions

adjusting parameters 1, 2

exponential linebroadening

Gaussian linebroadening

Kaiser

Wittekind, M. 1, 2

Workstation requirements

Wuthrich 1, 2, 3

Wuthrich, K. 1, 2, 3, 4, 5

X

X32 console

.Xdefaults file

X-PLOR coordinate file

Xu, R. X.

Y

Yip

Z

zero filling

Zhu, G.

Zolnai,. Z.

A

B

C

D

E

F

G

H

I

J

K

L

M

N

O

P

R

S

T

U

V

W

X

Y

Z

Index